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We are working on this feature right now: https://youtrack.jetbrains.com/issue/CPP-860, https://youtrack.jetbrains.com/issue/CPP-7772. We are planning to implement in in CLion 2016.3. Please stay tuned.

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We've added C project template in CLion 2016.3.2 EAP. Please, read more details in our blog: https://blog.jetbrains.com/clion/2016/12/clion-2016-3-2-eap/#prj_templates. Your feedback is more than welcome!

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