Build to external command line?

I'm working on a command line program that continually prints info to the screen, sort of how top continually refreshes the terminal window in linux, but whenever it builds and runs in Clion's terminal it has tons of blank gaps halfway through a frame. I've been using Code::Blocks which launches the program in the windows command line and works perfectly fine that way but I've been trying to onvert to a different IDE and was hoping CLion would be nice but it hasn't been the easiest thing to set up :\ Is there a way to make CLion run in the command line instead of the internal terminal shell thing?

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