I can't remember what I did exactly, but I think it was something as simple as using COMMAND+TAB+DOWN ARROW whilst having two IntelliJ windows open at the same time to go the Expose style view in Lion where you can select which window you want. After that, now whenever I do something like "Compare with Latest Version," the new diff window, which should open with the focus (i.e. on top of the main IntelliJ window) opens and is immediately minimized. Anyone know the fix for this??
Thanks! It's driving me crazy!