3354 Analyze Dependencies throws Assertion failed / NPE

In Irida 3354, if I click Analyze->Analyze Dependencies or Analyze Backward Dependencies, I immediately get an Assertion failed and NPE.

http://www.intellij.net/tracker/idea/viewSCR?publicId=48541

BTW I had never tried the Analyze Dependencies in 4.5.4 until just this week when I needed to untangle some java packages from the rest of the code so they could be distributed separately. It is the kind of feature that most of the time you don't care about, but then the one time you need it, it's a lifesaver.

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