I'm new to PhpStorm and I'm really liking it so far. The Git integration is great!
However, while I can push fine to our GitHub repositories, I'm having an issue with the diffs showing up within GitHub. Basically, if I edit 2 lines out of 100 total in a file, in GitHub, is shows 100 lines deleted and 100 added. This makes it impossible to determine what was changed from my pushes when viewing from within Github. If I edit a file outside of PhpStorm and push to the repository using the WIndows GitHub client, or the official Git tool, it shows the 100 lines but shows a minus for the 2 lines I deleted and a plus for the 2 lines I added.
Is there a setting I'm missing that can fix this? I'd like to have my pushes from PhpStorm show the diffs correctly from within Github.