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Annoying indexing

I use pycharm 2.0.2 on Ubuntu 11.10 x64, and i actively use many desktops (first for web brouser, second for pycharm etc). So i frequently switch between this. When Pycharm take focus - is start indexing project files and i can't work from half minute to minute after switch between desktops! How can i disable this checking changing of files?

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