Irida problem resolving jsp include directives?

I just have Irida a try using a copy of my 4.5.3 project. So far, the main problem is my jsp include directives aren't getting resolved.
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In 4.5.3, it would resolve this file to the Global.jsp located in my ]]>/jsp/Global.jsp, but using Irida with a copy of the project, it complains that the file doesn't exist.

Does anyone else have the same problem, or do you think it might be Irida as a problem using a web module created by 4.5.3 ?

Thanks,
-Alex