suggestion to improve working with files
it would be nice if WebIDE understands defining some variable or const as a path to directory
define("LIB_ROOT", realpath(dirname(__FILE__) . "/../lib/") . DIRECTORY_SEPARATOR);
and then use it in resolving files, that are being include across project, like:
require_once(LIB_ROOT . "/controller/view_dispatcher.php");
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Work in progress. We have bunch of different tickets on includes in tracker, specifically http://youtrack.jetbrains.net/issue/WI-178 for this one.
I must also note that this problem does not affect code editing/completion/navigation etc. - they are done by means of analyzing all actual source code.