Debugger Randomness

This was originally opened as a help ticket. I decided to move this to the community for added input.

It seems that the CLion cannot find standard libraries based upon the filenames. I have some header location `cpp/include/nested/`. In the top level directory, there are other filenames that are other file types. If I try adding a header file with the same name as another file type (ie foo.hpp and foo.m), no other header files can be found but those in the same directory.

CMake cache has been deleted. The build folder has been deleted and rebuilt. LD_LIBRARY_PATH is setup correctly.