Dead while using Clear case Check out

I am not sure what happened, it never came back, I hit Ctrl break after 10 min and here is the thread dump

Full thread dump Java HotSpot(TM) Client VM (1.5.0_05-b05 mixed mode):

"EditorCaretThread" prio=7 tid=0x0c4bacb8 nid=0x13f8 waiting on condition [0x0d8
3f000..0x0d83fce8]
at java.lang.Thread.sleep(Native Method)
at com.intellij.openapi.editor.impl.EditorImpl$RepaintCursorThread.run(E
ditorImpl.java:6)

"pool-3-thread-1" prio=5 tid=0x0c48f000 nid=0x33dc waiting on condition [0x0d7ff
000..0x0d7ffae8]
at sun.misc.Unsafe.park(Native Method)
at java.util.concurrent.locks.LockSupport.park(LockSupport.java:118)
at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject
.await(AbstractQueuedSynchronizer.java:1772)
at java.util.concurrent.DelayQueue.take(DelayQueue.java:131)
at java.util.concurrent.ScheduledThreadPoolExecutor$DelayedWorkQueue.tak
e(ScheduledThreadPoolExecutor.java:504)
at java.util.concurrent.ScheduledThreadPoolExecutor$DelayedWorkQueue.tak
e(ScheduledThreadPoolExecutor.java:497)
at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.ja
va:470)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor
.java:674)
at java.lang.Thread.run(Thread.java:595)

"UserActivityMonitor thread" prio=7 tid=0x039a02a0 nid=0x3678 in Object.wait() [
0x05d5f000..0x05d5fd68]
at java.lang.Object.wait(Native Method)
- waiting on (a java.lang.Object) at jetbrains.communicator.idea.monitor.UserActivityMonitor.run(UserActiv ityMonitor.java:129) - locked <0x118ec4c0> (a java.lang.Object) at java.lang.Thread.run(Thread.java:595) "Thread-9" prio=7 tid=0x039dfb80 nid=0x30b8 in Object.wait() [0x05ddf000..0x05dd f9e8] at java.lang.Object.wait(Native Method) - waiting on <0x1265c148> (a org.apache.xmlrpc.WebServer$Runner) at java.lang.Object.wait(Object.java:474) at org.apache.xmlrpc.WebServer$Runner.run(WebServer.java:657) - locked <0x1265c148>]]> (a org.apache.xmlrpc.WebServer$Runner)
at java.lang.Thread.run(Thread.java:595)

"/10.52.12.185 IDEtalk Multicast Thread" prio=7 tid=0x04b63d90 nid=0x132c runnab
le
at java.net.PlainDatagramSocketImpl.receive0(Native Method)
- locked (a java.net.PlainDatagramSocketImpl) at java.net.PlainDatagramSocketImpl.receive(PlainDatagramSocketImpl.java :136) - locked <0x1265c220> (a java.net.PlainDatagramSocketImpl) at java.net.DatagramSocket.receive(DatagramSocket.java:712) - locked <0x10811fd0> (a java.net.DatagramPacket) - locked <0x1265c260> (a java.net.MulticastSocket) at jetbrains.communicator.p2p.MulticastPingThread.run(MulticastPingThrea d.java:112) "User Monitor Thread" prio=7 tid=0x04a65d68 nid=0x534 in Object.wait() [0x05cdf0 00..0x05cdfb68] at java.lang.Object.wait(Native Method) - waiting on <0x1265c320> (a java.lang.Object) at jetbrains.communicator.p2p.UserMonitorThread.waitForNextSearch(UserMo nitorThread.java:212) - locked <0x1265c320> (a java.lang.Object) at jetbrains.communicator.p2p.UserMonitorThread.run(UserMonitorThread.ja va:131) "XML-RPC Weblistener" prio=7 tid=0x038e06b0 nid=0x71c runnable [0x05c9f000..0x05 c9fbe8] at java.net.PlainSocketImpl.socketAccept(Native Method) at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:384) - locked <0x1265c3a0> (a java.net.SocksSocketImpl) at java.net.ServerSocket.implAccept(ServerSocket.java:450) at java.net.ServerSocket.accept(ServerSocket.java:421) at org.apache.xmlrpc.WebServer.run(WebServer.java:453) at java.lang.Thread.run(Thread.java:595) "Network Message Dispatcher" prio=7 tid=0x03b88da0 nid=0x11c8 in Object.wait() [ 0x042cf000..0x042cfc68] at java.lang.Object.wait(Native Method) - waiting on <0x126373a8> (a java.lang.Object) at java.lang.Object.wait(Object.java:474) at jetbrains.communicator.core.impl.dispatcher.AsyncMessageDispatcherImp l.run(AsyncMessageDispatcherImpl.java:76) - locked <0x126373a8>]]> (a java.lang.Object)
at java.lang.Thread.run(Thread.java:595)

"IntelliTail - FileMonitor Thread" daemon prio=4 tid=0x049f5620 nid=0x145c in Ob
ject.wait()
at java.lang.Object.wait(Native Method)
- waiting on (a java.lang.Object) at org.intellij.plugin.tail.util.FileMonitor.run(FileMonitor.java:102) - locked <0x124c1848> (a java.lang.Object) "AlarmThread" prio=7 tid=0x04a8c3e0 nid=0x1f28 in Object.wait() [0x0498f000..0x0 498fa68] at java.lang.Object.wait(Native Method) - waiting on <0x11e3bb78> (a java.lang.Object) at java.lang.Object.wait(Object.java:474) at com.intellij.util.Alarm$MyThread.run(Alarm.java:217) - locked <0x11e3bb78> (a java.lang.Object) "Error Icon Blinker" prio=7 tid=0x030d6e70 nid=0x3060 waiting on condition [0x04 6cf000..0x046cfbe8] at java.lang.Thread.sleep(Native Method) at com.intellij.diagnostic.IdeMessagePanel$Blinker.run(IdeMessagePanel.j ava:11) "Fatal Errors Grouper" prio=7 tid=0x03c04bc0 nid=0x860 waiting on condition [0x0 468f000..0x0468fc68] at java.lang.Thread.sleep(Native Method) at com.intellij.diagnostic.MessagePool$MessageGrouper.run(MessagePool.ja va:24) "TimerQueue" daemon prio=5 tid=0x03a2bd00 nid=0x24b0 in Object.wait() [0x036ff00 0..0x036ffd68] at java.lang.Object.wait(Native Method) at javax.swing.TimerQueue.run(TimerQueue.java:233) - locked <0x1179bd38>]]> (a javax.swing.TimerQueue)
at java.lang.Thread.run(Thread.java:595)

"pool-1-thread-1" prio=5 tid=0x03b326d0 nid=0x3574 waiting on condition [0x0453f
000..0x0453f9e8]
at sun.misc.Unsafe.park(Native Method)
at java.util.concurrent.locks.LockSupport.park(LockSupport.java:118)
at java.util.concurrent.locks.AbstractQueuedSynchronizer$ConditionObject
.await(AbstractQueuedSynchronizer.java:1772)
at java.util.concurrent.LinkedBlockingQueue.take(LinkedBlockingQueue.jav
a:359)
at java.util.concurrent.ThreadPoolExecutor.getTask(ThreadPoolExecutor.ja
va:470)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor
.java:674)
at java.lang.Thread.run(Thread.java:595)

"StoreRefreshStatusThread" daemon prio=2 tid=0x03b13720 nid=0x24bc waiting on co
ndition
at java.lang.Thread.sleep(Native Method)
at com.intellij.openapi.vfs.impl.local.LocalFileSystemImpl$StoreRefreshS
tatusThread.run(LocalFileSystemImpl.java:9)

"WatchForChangesThread" prio=7 tid=0x03b128c0 nid=0x2014 runnable [0x044af000..0
x044afbe8]
at com.intellij.vfs.local.win32.FileWatcher.waitForChangeImpl(Native Met
hod)
at com.intellij.vfs.local.win32.FileWatcher.waitForChange(FileWatcher.ja
va:140)
at com.intellij.openapi.vfs.impl.local.LocalFileSystemImpl$WatchForChang
esThread.run(LocalFileSystemImpl.java:2)

"Progress Cancel Checker" prio=7 tid=0x03afad50 nid=0xfc0 waiting on condition [
0x0435f000..0x0435fc68]
at java.lang.Thread.sleep(Native Method)
at com.intellij.openapi.progress.impl.ProgressManagerImpl$1.run(Progress
ManagerImpl.java:1)

"XML-RPC Weblistener" prio=7 tid=0x030f4a28 nid=0x31ac runnable [0x0350f000..0x0
350fce8]
at java.net.PlainSocketImpl.socketAccept(Native Method)
at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:384)
- locked (a java.net.SocksSocketImpl) at java.net.ServerSocket.implAccept(ServerSocket.java:450) at java.net.ServerSocket.accept(ServerSocket.java:421) at org.apache.xmlrpc.WebServer.run(WebServer.java:453) at java.lang.Thread.run(Thread.java:595) "AWT-EventQueue-1" prio=7 tid=0x03a5f260 nid=0x35b0 runnable [0x0431e000..0x0431 fd68] at java.io.FileInputStream.readBytes(Native Method) at java.io.FileInputStream.read(FileInputStream.java:194) at java.io.BufferedInputStream.read1(BufferedInputStream.java:254) at java.io.BufferedInputStream.read(BufferedInputStream.java:313) - locked <0x12607bc8> (a java.io.BufferedInputStream) at java.io.BufferedInputStream.read1(BufferedInputStream.java:254) at java.io.BufferedInputStream.read(BufferedInputStream.java:313) - locked <0x1261bd70> (a java.io.BufferedInputStream) at sun.nio.cs.StreamDecoder$CharsetSD.readBytes(StreamDecoder.java:411) at sun.nio.cs.StreamDecoder$CharsetSD.implRead(StreamDecoder.java:453) at sun.nio.cs.StreamDecoder.read(StreamDecoder.java:183) - locked <0x12607bf8> (a java.io.InputStreamReader) at java.io.InputStreamReader.read(InputStreamReader.java:167) at java.io.BufferedReader.fill(BufferedReader.java:136) at java.io.BufferedReader.read1(BufferedReader.java:187) at java.io.BufferedReader.read(BufferedReader.java:261) - locked <0x12607bf8> (a java.io.InputStreamReader) at java.io.Reader.read(Reader.java:122) at net.sourceforge.clearcase.simple.ClearcaseCLI.readOutput(ClearcaseCLI .java:148) at net.sourceforge.clearcase.simple.ClearcaseCLI.execute(ClearcaseCLI.ja va:115) - locked <0x125f2d50> (a net.sourceforge.clearcase.simple.ClearcaseCLI) at net.sourceforge.clearcase.simple.ClearcaseCLI.checkin(ClearcaseCLI.ja va:219) at net.sourceforge.transparent.AbstractClearCase.checkIn(AbstractClearCa se.java:42) at net.sourceforge.transparent.AbstractClearCase.checkIn(AbstractClearCa se.java:38) at net.sourceforge.transparent.actions.AddAction.addFile(AddAction.java: 38) at net.sourceforge.transparent.actions.AddAction.performAction(AddAction .java:14) at net.sourceforge.transparent.actions.ClearCaseAction.actionPerformed(C learCaseAction.java:38) at com.intellij.openapi.actionSystem.impl.ActionMenuItem$ActionTransmitt er.actionPerformed(ActionMenuItem.java:13) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:18 49) at com.intellij.openapi.actionSystem.impl.ActionMenuItem.fireActionPerfo rmed(ActionMenuItem.java:40) at com.intellij.ui.plaf.beg.BegMenuItemUI.a(BegMenuItemUI.java:182) at com.intellij.ui.plaf.beg.BegMenuItemUI.access$300(BegMenuItemUI.java: 73) at com.intellij.ui.plaf.beg.BegMenuItemUI$MyMouseInputHandler.mouseRelea sed(BegMenuItemUI.java:8) at java.awt.Component.processMouseEvent(Component.java:5488) at javax.swing.JComponent.processMouseEvent(JComponent.java:3126) at java.awt.Component.processEvent(Component.java:5253) at java.awt.Container.processEvent(Container.java:1966) at java.awt.Component.dispatchEventImpl(Component.java:3955) at java.awt.Container.dispatchEventImpl(Container.java:2024) at java.awt.Component.dispatchEvent(Component.java:3803) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4212 ) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:3892) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:3822) at java.awt.Container.dispatchEventImpl(Container.java:2010) at java.awt.Window.dispatchEventImpl(Window.java:1774) at java.awt.Component.dispatchEvent(Component.java:3803) at java.awt.EventQueue.dispatchEvent(EventQueue.java:463) at com.intellij.ide.IdeEventQueue.b(IdeEventQueue.java:30) at com.intellij.ide.IdeEventQueue.a(IdeEventQueue.java:34) at com.intellij.ide.IdeEventQueue.dispatchEvent(IdeEventQueue.java:174) at java.awt.EventDispatchThread.pumpOneEventForHierarchy(EventDispatchTh read.java:242) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThre ad.java:163) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:157) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:149) at java.awt.EventDispatchThread.run(EventDispatchThread.java:110) "AWT-Shutdown" prio=7 tid=0x03a3c578 nid=0x10e4 in Object.wait() [0x0421f000..0x 0421f9e8] at java.lang.Object.wait(Native Method) - waiting on <0x11030508> (a java.lang.Object) at java.lang.Object.wait(Object.java:474) at sun.awt.AWTAutoShutdown.run(AWTAutoShutdown.java:259) - locked <0x11030508> (a java.lang.Object) at java.lang.Thread.run(Thread.java:595) "AlarmThread" prio=5 tid=0x03933d10 nid=0x3280 in Object.wait() [0x0417f000..0x0 417fae8] at java.lang.Object.wait(Native Method) - waiting on <0x11044878> (a java.lang.Object) at java.lang.Object.wait(Object.java:474) at com.intellij.util.Alarm$MyThread.run(Alarm.java:217) - locked <0x11044878> (a java.lang.Object) "AlarmThread" prio=5 tid=0x038eab30 nid=0x1334 in Object.wait() [0x0413f000..0x0 413fb68] at java.lang.Object.wait(Native Method) - waiting on <0x11044900> (a java.lang.Object) at com.intellij.util.Alarm$MyThread.run(Alarm.java:277) - locked <0x11044900> (a java.lang.Object) "Timer-0" daemon prio=5 tid=0x030f8cc8 nid=0x194c in Object.wait() [0x0362f000.. 0x0362fbe8] at java.lang.Object.wait(Native Method) - waiting on <0x11044970> (a java.util.TaskQueue) at java.util.TimerThread.mainLoop(Timer.java:509) - locked <0x11044970> (a java.util.TaskQueue) at java.util.TimerThread.run(Timer.java:462) "SocketListenerThread" prio=5 tid=0x031f3c58 nid=0x578 runnable [0x03cff000..0x0 3cffc68] at java.net.PlainDatagramSocketImpl.receive0(Native Method) - locked <0x11044a30> (a java.net.PlainDatagramSocketImpl) at java.net.PlainDatagramSocketImpl.receive(PlainDatagramSocketImpl.java :136) - locked <0x11044a30> (a java.net.PlainDatagramSocketImpl) at java.net.DatagramSocket.receive(DatagramSocket.java:712) - locked <0x108068e8> (a java.net.DatagramPacket) - locked <0x11044a70> (a java.net.MulticastSocket) at com.intellij.a.g.a.e.a(e.java:18) at com.intellij.a.g.a.f.run(f.java:8) "SocketListenerThread" prio=5 tid=0x031f3a48 nid=0x2ad0 runnable [0x03cbf000..0x 03cbfce8] at java.net.PlainDatagramSocketImpl.receive0(Native Method) - locked <0x11047258> (a java.net.PlainDatagramSocketImpl) at java.net.PlainDatagramSocketImpl.receive(PlainDatagramSocketImpl.java :136) - locked <0x11047258> (a java.net.PlainDatagramSocketImpl) at java.net.DatagramSocket.receive(DatagramSocket.java:712) - locked <0x11047298> (a java.net.DatagramPacket) - locked <0x110472b8> (a java.net.DatagramSocket) at com.intellij.a.g.a.e.a(e.java:18) at com.intellij.a.g.a.f.run(f.java:8) "MessageDeliveryThread" prio=5 tid=0x031f8038 nid=0x2c5c in Object.wait() [0x03c 7f000..0x03c7fd68] at java.lang.Object.wait(Native Method) - waiting on <0x11047358> (a java.lang.Object) at java.lang.Object.wait(Object.java:474) at com.intellij.a.g.r.run(r.java:28) - locked <0x11047358> (a java.lang.Object) "AWT-Windows" daemon prio=7 tid=0x030f59e0 nid=0x3720 runnable [0x0366f000..0x03 66fa68] at sun.awt.windows.WToolkit.eventLoop(Native Method) at sun.awt.windows.WToolkit.run(WToolkit.java:269) at java.lang.Thread.run(Thread.java:595) "Java2D Disposer" daemon prio=10 tid=0x030f83a8 nid=0x2b44 in Object.wait() [0x0 35ef000..0x035efb68] at java.lang.Object.wait(Native Method) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:116) - locked <0x11022598>]]> (a java.lang.ref.ReferenceQueue$Lock)
at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:132)
at sun.java2d.Disposer.run(Disposer.java:107)
at java.lang.Thread.run(Thread.java:595)

"Lock thread" prio=5 tid=0x030f7e08 nid=0x634 runnable
at java.net.PlainSocketImpl.socketAccept(Native Method)
at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:384)
- locked ]]> (a java.net.SocksSocketImpl)
at java.net.ServerSocket.implAccept(ServerSocket.java:450)
at java.net.ServerSocket.accept(ServerSocket.java:421)
at com.intellij.idea.SocketLock$MyRunnable.run(SocketLock.java:0)
at java.lang.Thread.run(Thread.java:595)

"DestroyJavaVM" prio=5 tid=0x00036568 nid=0x2fb4 waiting on condition [0x0000000
0..0x0007fae8]

"Low Memory Detector" daemon prio=5 tid=0x030358c8 nid=0x21dc runnable [0x000000
00..0x00000000]

"CompilerThread0" daemon prio=10 tid=0x00c74e20 nid=0x366c waiting on condition


"Signal Dispatcher" daemon prio=10 tid=0x030337e8 nid=0x35b8 waiting on conditio
n

"YJPAgent-CPUSampler" daemon prio=5 tid=0x00c5c038 nid=0x2b48 runnable [0x000000
00..0x00000000]

"YJPAgent-RequestListener" daemon prio=2 tid=0x03031b98 nid=0x29e4 runnable [0x0
32cf000..0x032cfb68]
at java.net.PlainSocketImpl.socketAccept(Native Method)
at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:384)
- locked ]]> (a java.net.SocksSocketImpl)
at java.net.ServerSocket.implAccept(ServerSocket.java:450)
at java.net.ServerSocket.accept(ServerSocket.java:421)
at com.yourkit.runtime.Core$2.run(Core.java:320)
at java.lang.Thread.run(Thread.java:595)

"YJPAgent-Telemetry" daemon prio=2 tid=0x030319f0 nid=0x10c8 waiting on conditio
n
at java.lang.Thread.sleep(Native Method)
at com.yourkit.runtime.telemetry.TelemetryThread.run(TelemetryThread.jav
a:272)

"Finalizer" daemon prio=9 tid=0x00c76e78 nid=0x2620 in Object.wait() [0x0300f000
..0x0300fc68]
at java.lang.Object.wait(Native Method)
at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:116)
- locked (a java.lang.ref.ReferenceQueue$Lock) at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:132) at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:159) "Reference Handler" daemon prio=10 tid=0x00c29148 nid=0xdf4 in Object.wait() [0x 02fcf000..0x02fcfce8] at java.lang.Object.wait(Native Method) at java.lang.Object.wait(Object.java:474) at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:116) - locked <0x10f71408>]]> (a java.lang.ref.Reference$Lock)

"VM Thread" prio=10 tid=0x00c71058 nid=0x21bc runnable

"VM Periodic Task Thread" prio=10 tid=0x03036d30 nid=0x31a8 waiting on condition